Jeremy Nathans

Academic Titles: 
Professor
Appointments/Affiliations: 

Biochemistry, Cellular & Molecular Biology (BCMB)
Neuroscience
Cellular and Molecular Medicine (CMM)

725 N. Wolfe Street
805A PCTB
Baltimore, MD 21205

Research Interest: 
Molecular mechanisms of mammalian development
Biology: Frizzled receptors in development and disease
Our laboratory has focused for the past two decades on a large family of cell-surface receptors called Frizzled. This name refers to the appearance of fruit flies in which the receptor gene is mutated: the hairs and bristles on the body surface of Frizzled mutant flies are oriented inappropriately. In mammals, including humans, there are ten closely related Frizzled genes. In the mid-1990s, we showed, in collaboration with the laboratory of Roel Nusse at Stanford, that the principal ligands for Frizzleds are the Wnt proteins. There are 19 Wnt genes in mammals, and current evidence suggests that each Frizzled can bind to multiple of Wnts and each Wnt can bind to multiple Frizzleds. To add to the complexity, three distinct types of signals can be sent from Frizzled receptors to the cell interior.
 
Our current focus is on defining the roles of Frizzled receptors in mammalian development. The foundation of our approach is the production and analysis of mice carrying targeted null or conditional null mutations in one or more Frizzled genes. We have constructed such lines for each of the ten Frizzleds, as well as for other genes that act in the same signaling pathways. This genetic analysis has revealed both diversity and unity in the functions of different Frizzled receptors, and has revealed the requirement for Frizzled signaling in a wide variety of developmental contexts, including axon guidance, vascular growth and differentiation, inner ear development, neural tube and palate closure, kidney development, and hair orientation on the body surface. In the context of vascular growth and differentiation, we identified a novel ligand (Norrin) that acts exclusively on the Frizzled (Frizzled4) that controls vascular development. In humans, mutations in the Norrin or Frizzled4 genes, or in genes coding for a co-receptor (Lrp5) or chaperone (Tspan12) produce vascular defects similar to their mouse counterparts. Current experiments are aimed at (1) identifying additional roles for Frizzleds in mammalian development, homeostasis, and disease, and (2) elucidating the molecular logic of Frizzled signaling.
 
Technology: new tools for mouse genetics and neuroscience
For the past decade we have been developing new genetic tools for visualizing and manipulating single identified cells in mice. Our approaches build on existing methods that use pharmacologic control of cre-loxP recombination. In one set of experiments we created a variety of knock-in alleles in which a pair of loxP sites flank the coding region and 3’ untranslated region (UTR) of a gene of interest, with a reporter gene inserted distal to the 3’-most loxP site. When the conditional knockout allele is placed over a WT allele, cre-mediated recombination creates heterozygous cells that exhibit reporter expression under the control of the promoter for the gene of interest. When the conditional knockout allele is placed over a conventional null allele in the gene of interest, cre-mediated recombination creates mutant cells that are similarly marked by expression of the reporter. By pharmacologic titration of cre activity, one can generate sparse mosaics of recombined cells, thereby permitting an analysis of individual mutant cells in an otherwise WT environment. 
 
Genetically-directed sparse recombination is especially useful for determining the morphology of genetically defined neurons. For some extremely large and complex neurons – such as forebrain cholinergic neurons, dopaminergic amacrine cells in the retina, and large cutaneous sensory neurons in the skin – visualizing the full structure of individual axonal or dendritic arbors has required labeling densities of only one or a few neurons per animal. Experiments currently in progress are extending these approaches to the visualization of distinct subcellular structures in individual identified cells and to the tracing of cell lineages in a variety of contexts. 
 
Biosketch: 
Lab Members:
Namesort descending Classification Email
Amir Rattner Research Associate arattne1@jhmi.edu
Chris Cho Graduate Student ccho21@jhmi.edu
Francesco Emiliani Research Technologist femilia1@jhu.edu
Hao Chang Research Specialist haochang@jhmi.edu
Hong Lei Research Specialist
Jacob Heng Graduate Student jheng3@jhmi.edu
John Williams Research Technologist jwilli67@jhmi.edu
Mark Sabbagh Graduate Student msabbag2@jhmi.edu
Philip Smallwood Research Technologist psmallw2@jhmi.edu
Xi Peng Graduate Student xpeng11@jhmi.edu
Xiaowu (Andy) Gu Postdoctoral Fellow xgu12@jhmi.edu
Yanshu Wang Research Specialist ywang@jhmi.edu
Selected Publications:
Sun LO, Brady CM, Cahill H, Al-Khindi T, Sakuta H, Dhande OS, Noda M, Huberman AD, Nathans J, Kolodkin AL. (2015) Functional assembly of accessory optic system circuitry critical for compensatory eye movements. Neuron 86(4):971-84.  [ pdf ]
Vanhollebeke B, Stone OA, Bostaille N, Cho C, Zhou Y, Maquet E, Gauquier A, Cabochette P, Fukuhara S, Mochizuki N, Nathans J, Stainier DY. (2015) Tip cell-specific requirement for an atypical Gpr124- and Reck-dependent Wnt/β-catenin pathway during brain angiogenesis. Elife 4. doi: 10.7554/eLife.06489. [ pdf ]
Mo A, Mukamel EA, Davis FP, Luo C, Henry GL, Picard S, Urich MA, Nery JR, Sejnowski TJ, Lister R, Eddy SR, Ecker JR, Nathans J. (2015) Epigenomic Signatures of Neuronal Diversity in the Mammalian Brain. Neuron 86(6):1369-84.  [ pdf ]
Hua ZL, Emiliani FE, Nathans J. (2015) Rac1 plays an essential role in axon growth and guidance and in neuronal survival in the central and peripheral nervous systems. Neural Development 10(1):21.  [ pdf ]
Chang H, Cahill H, Smallwood PM, Wang Y, Nathans J. (2015) Identification of Astrotactin2 as a Genetic Modifier That Regulates the Global Orientation of Mammalian Hair Follicles. PLoS Genetics 11(9):e1005532.  [ pdf ]
Zhou Y, Nathans J. (2014) Gpr124 controls CNS angiogenesis and blood-brain barrier integrity by promoting ligand-specific canonical Wnt signaling. Developmental Cell 31: 248-256. [ link ]
Hua ZL, Chang H, Wang Y, Smallwood PM, Nathans J. (2014) Partial interchangeability of Frizzled3 and Frizzled6 in tissue polarity signaling for epithelial orientation and axon growth and guidance. Development 141: 3944-3954. [ link ]
Zhou Y, Wang Y, Tischfield M, Williams J, Smallwood PM, Rattner A, Taketo MM, Nathans J. (2014) Canonical Wnt signaling components in vascular development and barrier formation. Journal of Clinical Investigation 124: 3825-3846. [ link ]
Hua ZL, Jeon S, Caterina M, Nathans J. (2014) Frizzled3 is required for the development of multiple axon tracts in the mouse central nervous system. Proceedings of the National Academy of Sciences USA 111: E3005-3014. [ link ]
Wu H, Williams J, Nathans J. (2014) Complete morphologies of basal forebrain cholinergic neurons in the mouse. eLife 3:e02444. [ link ]
Wu H, Luo J, Yu H, Rattner A, Mo A, Wang YSmallwood PM, Erlanger B, Wheelan SJ, Nathans J. (2014) Cellular resolution maps of X-chromosome inactivation: implications for neural development, function, and disease. Neuron 81: 103-119. [ link ]
Hua L, Smallwood PM, Nathans J. (2013) Frizzled3 controls axonal development in distinct populations of cranial and spinal motor neurons. eLife 2: e01482. [ link ]
Chang H, Nathans J. (2013) Responses of hair follicle-associated structures to loss of planar cell polarity signaling. Proceedings of the National Academy of Sciences USA E908-E917. [ link ]
Rattner A, Yu H, Williams J, Smallwood PM, Nathans J. (2013) Endothelin2 signaling in the neural retina promotes the endothelial tip cell state and inhibits angiogenesis. Proceedings of the National Academy of Sciences USA 110: E3830-E3839. [ link ]
Wu H, Williams J, Nathans J. (2012) Morphologic diversity of cutaneous sensory afferents revealed by genetically directed sparse labeling. eLife 1: e00181. [ link ]
Julius D, Nathans J. (2012) Signaling by Sensory Receptors. Cold Spring Harb Perspectives in Biology 4:a005991. [ link ]
Yu H, Ye X, Guo N, Nathans J. (2012) Frizzled2 and Frizzled7 function redundantly in convergent extension and closure of the ventricular septum and palate: evidence for a network of interacting genes. Development 139: 4383-4394. [ link ]
Badea TC, Williams J, Smallwood P, Shi M, Motajo O, Nathans J. (2012) Combinatorial expression of Brn3 transcription factors in somatosensory neurons: genetic and morphologic analysis. Journal of Neuroscience 32: 995-1007. [ link ]
Wang Y, Rattner A, Zhou Y, Williams J, Smallwood PM, Nathans J. (2012) Norrin/Frizzled4 signaling in retinal vascular development and blood brain barrier plasticity. Cell 151: 1332-1344. [ link ]