Enhancers That Direct Gene Expression to Central Nervous System Vascular Endothelial Cell

Work by Zhongming Li, Amir Rattner, Yanshu Wang, Phil Smallwood, and Mark Sabbagh from the Nathans lab:

Central nervous system (CNS) vascular endothelial cells exhibit a distinctive gene expression program that is foundational for the blood-brain barrier (BBB).  Previous research identified candidate cis-regulatory elements (enhancers and repressors) that were hypothesized to control this program.  Using transgenic mice and recombinant adeno-associated virus vectors (rAAVs), Zhongming Li and his colleagues on the Nathans laboratory have interrogated these candidate cis-regulatory elements in vivo.  These experiments show that an 850 bp genomic DNA segment ~60 kb 5’ of Slc2a1, a gene that encodes an essential BBB transporter protein, possesses enhancer activity that is (1) specific for CNS endothelial cells and (2) both necessary and sufficient for BBB+ endothelial cells gene expression.  A screen of >8,000 genomic DNA segments that represent candidate CNS endothelial cell-specific cis-regulatory elements revealed several hundred with enhancer activity.  Transcription factors ERG and LEF1, the partner of beta-catenin, were shown to occupy sites in brain EC chromatin that are highly enriched in candidate and experimentally validated cis-regulatory elements, lending strong support to a model in which canonical Wnt signaling activates the BBB program via LEF1.

JN11, an 850 bp sequence located 60 kb 5’ of Slc2a1, directs transgene expression exclusively to central nervous system vascular endothelial cells